A0A1R3RF32 protein (Aspergillus carbonarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1R3RF32

Protein kinase domain-containing protein. (517 aa)

Predicted Functional Partners:

A0A1R3R9I4

0.772

A0A1R3RF54

0.720

A0A1R3R6E5

0.703

A0A1R3RFD0

0.703

A0A1R3RFG5

0.703

A0A1R3RRA8

0.675

A0A1R3RZK2

0.649

A0A1R3RSB4

0.647

A0A1R3R9I2

0.643

A0A1R3RD66

0.636

Your Current Organism:

Aspergillus carbonarius

NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1R3R6E5	A0A1R3R9I4	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Carbohydrate-binding module family 48 protein.	0.952
A0A1R3R6E5	A0A1R3RD66	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Uncharacterized protein.	0.704
A0A1R3R6E5	A0A1R3RF32	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Protein kinase domain-containing protein.	0.703
A0A1R3R6E5	A0A1R3RSB4	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	WD_REPEATS_REGION domain-containing protein.	0.679
A0A1R3R6E5	A0A1R3RZK2	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Uncharacterized protein.	0.689
A0A1R3R9I2	A0A1R3RF32	Uncharacterized protein.	Protein kinase domain-containing protein.	0.643
A0A1R3R9I2	A0A1R3RF54	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A1R3R9I4	A0A1R3R6E5	Carbohydrate-binding module family 48 protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.952
A0A1R3R9I4	A0A1R3RD66	Carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.757
A0A1R3R9I4	A0A1R3RF32	Carbohydrate-binding module family 48 protein.	Protein kinase domain-containing protein.	0.772
A0A1R3R9I4	A0A1R3RFD0	Carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.974
A0A1R3R9I4	A0A1R3RFG5	Carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.974
A0A1R3R9I4	A0A1R3RRA8	Carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.925
A0A1R3R9I4	A0A1R3RSB4	Carbohydrate-binding module family 48 protein.	WD_REPEATS_REGION domain-containing protein.	0.720
A0A1R3R9I4	A0A1R3RZK2	Carbohydrate-binding module family 48 protein.	Uncharacterized protein.	0.707
A0A1R3RD66	A0A1R3R6E5	Uncharacterized protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.704
A0A1R3RD66	A0A1R3R9I4	Uncharacterized protein.	Carbohydrate-binding module family 48 protein.	0.757
A0A1R3RD66	A0A1R3RF32	Uncharacterized protein.	Protein kinase domain-containing protein.	0.636
A0A1R3RD66	A0A1R3RFD0	Uncharacterized protein.	Uncharacterized protein.	0.714
A0A1R3RD66	A0A1R3RFG5	Uncharacterized protein.	Uncharacterized protein.	0.714