A0A1R3RGI7 protein (Aspergillus carbonarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1R3RGI7

Uncharacterized protein. (510 aa)

Predicted Functional Partners:

A0A1R3RIU9

0.839

A0A1R3RAQ9

0.757

A0A1R3RYS8

0.734

A0A1R3RIE9

0.694

A0A1R3R864

0.692

A0A1R3S293

0.692

A0A1R3RVH3

0.691

A0A1R3RRM8

0.690

A0A1R3RMX3

0.678

A0A1R3RSE2

0.678

Your Current Organism:

Aspergillus carbonarius

NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1R3R864	A0A1R3RGI7	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.692
A0A1R3R864	A0A1R3RIU9	FAD-binding FR-type domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.920
A0A1R3R864	A0A1R3RVH3	FAD-binding FR-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.736
A0A1R3R864	A0A1R3S293	FAD-binding FR-type domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.977
A0A1R3RAQ9	A0A1R3RGI7	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.757
A0A1R3RAQ9	A0A1R3RIU9	3Beta_HSD domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.474
A0A1R3RAQ9	A0A1R3RMX3	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.934
A0A1R3RAQ9	A0A1R3RRM8	3Beta_HSD domain-containing protein.	S5A_REDUCTASE domain-containing protein.	0.701
A0A1R3RAQ9	A0A1R3RSE2	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.934
A0A1R3RAQ9	A0A1R3RVH3	3Beta_HSD domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.874
A0A1R3RAQ9	A0A1R3RYS8	3Beta_HSD domain-containing protein.	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	0.836
A0A1R3RGI7	A0A1R3R864	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.692
A0A1R3RGI7	A0A1R3RAQ9	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.757
A0A1R3RGI7	A0A1R3RIE9	Uncharacterized protein.	Opy2 domain-containing protein.	0.694
A0A1R3RGI7	A0A1R3RIU9	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.839
A0A1R3RGI7	A0A1R3RMX3	Uncharacterized protein.	Uncharacterized protein.	0.678
A0A1R3RGI7	A0A1R3RRM8	Uncharacterized protein.	S5A_REDUCTASE domain-containing protein.	0.690
A0A1R3RGI7	A0A1R3RSE2	Uncharacterized protein.	Uncharacterized protein.	0.678
A0A1R3RGI7	A0A1R3RVH3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.691
A0A1R3RGI7	A0A1R3RYS8	Uncharacterized protein.	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.	0.734