A0A1R3RN59 protein (Aspergillus carbonarius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1R3RN59

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)

Predicted Functional Partners:

A0A1R3RSG6

0.949

A0A1R3RMT3

0.945

A0A1R3RP50

0.944

A0A1R3RB38

0.942

A0A1R3RCV2

0.934

A0A1R3RGV2

0.930

A0A1R3R650

0.923

A0A1R3RUR8

0.917

A0A1R3RXE5

0.916

A0A1R3RE39

0.905

Your Current Organism:

Aspergillus carbonarius

NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1R3R650	A0A1R3RB38	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.979
A0A1R3R650	A0A1R3RCV2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.999
A0A1R3R650	A0A1R3RGV2	Protein kinase domain-containing protein.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.593
A0A1R3R650	A0A1R3RMT3	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.979
A0A1R3R650	A0A1R3RN59	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.923
A0A1R3R650	A0A1R3RP50	Protein kinase domain-containing protein.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.553
A0A1R3R650	A0A1R3RSG6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.410
A0A1R3R650	A0A1R3RUR8	Protein kinase domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.964
A0A1R3R650	A0A1R3RXE5	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.998
A0A1R3RB38	A0A1R3R650	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.979
A0A1R3RB38	A0A1R3RCV2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.963
A0A1R3RB38	A0A1R3RE39	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.702
A0A1R3RB38	A0A1R3RGV2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.955
A0A1R3RB38	A0A1R3RN59	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.942
A0A1R3RB38	A0A1R3RP50	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.953
A0A1R3RB38	A0A1R3RUR8	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	WD_REPEATS_REGION domain-containing protein.	0.958
A0A1R3RB38	A0A1R3RXE5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Rhodanese domain-containing protein.	0.916
A0A1R3RCV2	A0A1R3R650	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.999
A0A1R3RCV2	A0A1R3RB38	Protein kinase domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.963
A0A1R3RCV2	A0A1R3RGV2	Protein kinase domain-containing protein.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.641