STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1R3S0N8Peptidase S53 domain-containing protein. (596 aa)    
Predicted Functional Partners:
A0A1R3R740
ANK_REP_REGION domain-containing protein.
   
  0.633
A0A1R3RBL3
ANK_REP_REGION domain-containing protein.
   
  0.633
A0A1R3RM18
Uncharacterized protein.
    
  0.533
A0A1R3RTH3
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
      
 0.529
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
      
 0.529
A0A1R3RL06
Isocitrate lyase.
      
 0.528
A0A1R3S3B2
Guanylate kinase-like domain-containing protein.
    
 0.510
A0A1R3RLP6
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.509
A0A1R3RB03
Telo_bind domain-containing protein.
    
 0.492
A0A1R3RUJ8
MRG domain-containing protein.
    
  0.484
Your Current Organism:
Aspergillus carbonarius
NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010
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