Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO86407.1 | SFO90537.1 | SAMN04488060_0388 | SAMN04488060_0639 | Glutamate synthase (NADH) large subunit. | L-threonine aldolase. | 0.467 |
SFO86407.1 | SFO96053.1 | SAMN04488060_0388 | SAMN04488060_0984 | Glutamate synthase (NADH) large subunit. | Aminomethyltransferase. | 0.954 |
SFO86407.1 | SFO96104.1 | SAMN04488060_0388 | SAMN04488060_0987 | Glutamate synthase (NADH) large subunit. | Glycine dehydrogenase (decarboxylating) beta subunit. | 0.949 |
SFO86407.1 | SFP06023.1 | SAMN04488060_0388 | SAMN04488060_1202 | Glutamate synthase (NADH) large subunit. | Dihydrolipoamide dehydrogenase. | 0.888 |
SFO86407.1 | SFP42225.1 | SAMN04488060_0388 | SAMN04488060_2810 | Glutamate synthase (NADH) large subunit. | Dihydrolipoamide dehydrogenase. | 0.888 |
SFO86407.1 | gcvH | SAMN04488060_0388 | SAMN04488060_0985 | Glutamate synthase (NADH) large subunit. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.943 |
SFO86407.1 | gcvPA | SAMN04488060_0388 | SAMN04488060_0986 | Glutamate synthase (NADH) large subunit. | Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.945 |
SFO86407.1 | glyA | SAMN04488060_0388 | SAMN04488060_2709 | Glutamate synthase (NADH) large subunit. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.948 |
SFO88529.1 | SFO96104.1 | SAMN04488060_0527 | SAMN04488060_0987 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Glycine dehydrogenase (decarboxylating) beta subunit. | 0.940 |
SFO88529.1 | gcvPA | SAMN04488060_0527 | SAMN04488060_0986 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.659 |
SFO88529.1 | glyA | SAMN04488060_0527 | SAMN04488060_2709 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.463 |
SFO90537.1 | SFO86407.1 | SAMN04488060_0639 | SAMN04488060_0388 | L-threonine aldolase. | Glutamate synthase (NADH) large subunit. | 0.467 |
SFO90537.1 | SFO96053.1 | SAMN04488060_0639 | SAMN04488060_0984 | L-threonine aldolase. | Aminomethyltransferase. | 0.624 |
SFO90537.1 | SFO96104.1 | SAMN04488060_0639 | SAMN04488060_0987 | L-threonine aldolase. | Glycine dehydrogenase (decarboxylating) beta subunit. | 0.922 |
SFO90537.1 | SFP37556.1 | SAMN04488060_0639 | SAMN04488060_2640 | L-threonine aldolase. | 5-aminolevulinate synthase. | 0.911 |
SFO90537.1 | gcvPA | SAMN04488060_0639 | SAMN04488060_0986 | L-threonine aldolase. | Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.921 |
SFO90537.1 | glyA | SAMN04488060_0639 | SAMN04488060_2709 | L-threonine aldolase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.944 |
SFO96053.1 | SFO86407.1 | SAMN04488060_0984 | SAMN04488060_0388 | Aminomethyltransferase. | Glutamate synthase (NADH) large subunit. | 0.954 |
SFO96053.1 | SFO90537.1 | SAMN04488060_0984 | SAMN04488060_0639 | Aminomethyltransferase. | L-threonine aldolase. | 0.624 |
SFO96053.1 | SFO96104.1 | SAMN04488060_0984 | SAMN04488060_0987 | Aminomethyltransferase. | Glycine dehydrogenase (decarboxylating) beta subunit. | 0.999 |
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