STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP11696.1Hypothetical protein. (546 aa)    
Predicted Functional Partners:
SFP11735.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
    
  0.881
SFP11713.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
    
  0.872
SFP11758.1
Polysaccharide export outer membrane protein.
    
  0.867
SFP11680.1
Putative secretion ATPase, PEP-CTERM locus subfamily.
       0.797
SFP11617.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
       0.757
SFP11659.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
       0.757
SFP11641.1
FemAB-related protein, PEP-CTERM system-associated.
       0.730
SFP44406.1
Capsular exopolysaccharide family.
    
 0.632
SFP11602.1
Exosortase A.
       0.607
SFP11576.1
Asparagine synthase (glutamine-hydrolysing).
       0.580
Your Current Organism:
Erythrobacter nanhaisediminis
NCBI taxonomy Id: 604088
Other names: CGMCC 1.7715, E. nanhaisediminis, Erythrobacter nanhaisediminis Xu et al. 2010, Erythrobacter sp. T30, JCM 16125, strain T30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.