STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP14670.1Nitroreductase. (223 aa)    
Predicted Functional Partners:
SFP21311.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.632
SFP32596.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.617
SFP32989.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.617
SFP14648.1
Ubiquinone biosynthesis protein COQ4.
       0.546
SFP20349.1
Hydroxyacylglutathione hydrolase.
 
  
 0.487
SFP08570.1
Hydroxyacylglutathione hydrolase.
 
  
 0.484
SFP14634.1
Protein of unknown function.
 
     0.455
SFO97347.1
2,4-dienoyl-CoA reductase.
  
 
  0.450
SFO90353.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.445
SFP14426.1
ABC-2 type transport system permease protein.
  
    0.444
Your Current Organism:
Erythrobacter nanhaisediminis
NCBI taxonomy Id: 604088
Other names: CGMCC 1.7715, E. nanhaisediminis, Erythrobacter nanhaisediminis Xu et al. 2010, Erythrobacter sp. T30, JCM 16125, strain T30
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