STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP21262.1Transcriptional regulator, LacI family. (349 aa)    
Predicted Functional Partners:
SFO86407.1
Glutamate synthase (NADH) large subunit.
    
 
 0.950
SFP33235.1
Phosphocarrier protein.
   
 
 0.912
SFP21236.1
Beta-glucosidase.
 
  
  0.850
SFP21246.1
Major Facilitator Superfamily protein.
 
   
 0.846
SFP21278.1
TonB-dependent receptor.
 
     0.775
SFP21293.1
Tryptophan halogenase.
 
     0.690
SFP21214.1
MFS transporter, FHS family, L-fucose permease.
 
   
 0.669
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
   0.621
SFO95969.1
Beta-glucosidase.
 
  
  0.553
SFO92235.1
Allosteric NADP-dependent malic enzyme.
    
 
 0.545
Your Current Organism:
Erythrobacter nanhaisediminis
NCBI taxonomy Id: 604088
Other names: CGMCC 1.7715, E. nanhaisediminis, Erythrobacter nanhaisediminis Xu et al. 2010, Erythrobacter sp. T30, JCM 16125, strain T30
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.