STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP23822.1acyl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
SFP23803.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.920
SFO94737.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
  0.887
SFO82183.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.757
SFO87254.1
Enoyl-CoA hydratase/isomerase.
   
  0.712
SFP07989.1
Enoyl-CoA hydratase.
   
  0.712
SFP22365.1
Enoyl-CoA hydratase.
   
  0.712
SFO90187.1
Electron transfer flavoprotein alpha subunit apoprotein.
  0.708
SFP23783.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.690
SFP23909.1
glutaryl-CoA dehydrogenase.
  
  
 
0.596
SFO88208.1
Long-chain acyl-CoA synthetase.
  
  0.594
Your Current Organism:
Erythrobacter nanhaisediminis
NCBI taxonomy Id: 604088
Other names: CGMCC 1.7715, E. nanhaisediminis, Erythrobacter nanhaisediminis Xu et al. 2010, Erythrobacter sp. T30, JCM 16125, strain T30
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