STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP25121.1Hypothetical protein. (380 aa)    
Predicted Functional Partners:
SFP25139.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.483
SFP44745.1
Outer membrane immunogenic protein.
  
     0.423
SFP05420.1
Outer membrane immunogenic protein.
  
     0.422
Your Current Organism:
Erythrobacter nanhaisediminis
NCBI taxonomy Id: 604088
Other names: CGMCC 1.7715, E. nanhaisediminis, Erythrobacter nanhaisediminis Xu et al. 2010, Erythrobacter sp. T30, JCM 16125, strain T30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.