STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN61974.1Copper resistance protein D. (149 aa)    
Predicted Functional Partners:
SEN62002.1
Hemerythrin HHE cation binding domain-containing protein.
       0.752
SEN61938.1
Pyruvate formate lyase activating enzyme.
 
     0.646
SEN61891.1
Anaerobic ribonucleoside-triphosphate reductase.
       0.601
SEN62042.1
Transcriptional regulator, BadM/Rrf2 family.
       0.574
SEO33310.1
Protein TonB.
  
     0.456
SEN61494.1
Nitrite reductase (NO-forming).
 
   
 0.418
Your Current Organism:
Flavobacterium sinopsychrotolerans
NCBI taxonomy Id: 604089
Other names: CGMCC 1.8704, F. sinopsychrotolerans, Flavobacterium sinopsychrotolerans Xu et al. 2011, Flavobacterium sp. 0533, JCM 16398, strain 0533
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.