STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN62834.1Por secretion system C-terminal sorting domain-containing protein. (618 aa)    
Predicted Functional Partners:
SEN77852.1
Hypothetical protein.
  
     0.774
SEN70847.1
Hypothetical protein.
  
     0.772
SEN65559.1
Exosortase F-associated protein.
  
     0.769
SEO67639.1
Glycosyl transferases group 1.
  
     0.765
SEO67684.1
O-antigen ligase like membrane protein.
  
     0.763
SEN65584.1
Exosortase family protein XrtF.
  
     0.761
SEN81518.1
phenylacetate-CoA ligase.
  
     0.761
SEO52876.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
     0.756
SEO67587.1
Glycosyltransferase, GT2 family.
  
     0.752
SEO60815.1
Tetratricopeptide repeat-containing protein.
  
     0.748
Your Current Organism:
Flavobacterium sinopsychrotolerans
NCBI taxonomy Id: 604089
Other names: CGMCC 1.8704, F. sinopsychrotolerans, Flavobacterium sinopsychrotolerans Xu et al. 2011, Flavobacterium sp. 0533, JCM 16398, strain 0533
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