Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN65284.1 | SEN80563.1 | SAMN04487942_0489 | SAMN04487942_1024 | Hypothetical protein. | Protein of unknown function. | 0.631 |
SEN65284.1 | SEN99480.1 | SAMN04487942_0489 | SAMN04487942_1492 | Hypothetical protein. | Family of unknown function. | 0.728 |
SEN65284.1 | SEO34508.1 | SAMN04487942_0489 | SAMN04487942_2513 | Hypothetical protein. | Protein of unknown function. | 0.665 |
SEN65284.1 | SEO42158.1 | SAMN04487942_0489 | SAMN04487942_2728 | Hypothetical protein. | Outer membrane lipoprotein-sorting protein. | 0.566 |
SEN80534.1 | SEN80563.1 | SAMN04487942_1023 | SAMN04487942_1024 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Protein of unknown function. | 0.738 |
SEN80534.1 | SEN80609.1 | SAMN04487942_1023 | SAMN04487942_1025 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Tetratricopeptide repeat-containing protein. | 0.879 |
SEN80534.1 | SEN80638.1 | SAMN04487942_1023 | SAMN04487942_1026 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Glucose-1-phosphate thymidylyltransferase. | 0.613 |
SEN80534.1 | dut | SAMN04487942_1023 | SAMN04487942_1027 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.520 |
SEN80563.1 | SEN65284.1 | SAMN04487942_1024 | SAMN04487942_0489 | Protein of unknown function. | Hypothetical protein. | 0.631 |
SEN80563.1 | SEN80534.1 | SAMN04487942_1024 | SAMN04487942_1023 | Protein of unknown function. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.738 |
SEN80563.1 | SEN80609.1 | SAMN04487942_1024 | SAMN04487942_1025 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.836 |
SEN80563.1 | SEN80638.1 | SAMN04487942_1024 | SAMN04487942_1026 | Protein of unknown function. | Glucose-1-phosphate thymidylyltransferase. | 0.712 |
SEN80563.1 | SEN99480.1 | SAMN04487942_1024 | SAMN04487942_1492 | Protein of unknown function. | Family of unknown function. | 0.630 |
SEN80563.1 | SEO32835.1 | SAMN04487942_1024 | SAMN04487942_2452 | Protein of unknown function. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.604 |
SEN80563.1 | SEO34508.1 | SAMN04487942_1024 | SAMN04487942_2513 | Protein of unknown function. | Protein of unknown function. | 0.652 |
SEN80563.1 | SEO42158.1 | SAMN04487942_1024 | SAMN04487942_2728 | Protein of unknown function. | Outer membrane lipoprotein-sorting protein. | 0.729 |
SEN80563.1 | SEO54522.1 | SAMN04487942_1024 | SAMN04487942_3025 | Protein of unknown function. | LPS export ABC transporter protein LptC. | 0.655 |
SEN80563.1 | dut | SAMN04487942_1024 | SAMN04487942_1027 | Protein of unknown function. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.593 |
SEN80609.1 | SEN80534.1 | SAMN04487942_1025 | SAMN04487942_1023 | Tetratricopeptide repeat-containing protein. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.879 |
SEN80609.1 | SEN80563.1 | SAMN04487942_1025 | SAMN04487942_1024 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.836 |
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