Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN82814.1 | SEO08679.1 | SAMN04487942_1099 | SAMN04487942_1681 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.601 |
SEN82814.1 | SEO20926.1 | SAMN04487942_1099 | SAMN04487942_2044 | RNA polymerase sigma-70 factor, ECF subfamily. | Anti-sigma-K factor rskA. | 0.567 |
SEN82814.1 | SEO21758.1 | SAMN04487942_1099 | SAMN04487942_2080 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase Rpb6. | 0.586 |
SEN82814.1 | rpoA | SAMN04487942_1099 | SAMN04487942_3234 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.586 |
SEN82814.1 | rpoB | SAMN04487942_1099 | SAMN04487942_0340 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.657 |
SEN82814.1 | rpoC | SAMN04487942_1099 | SAMN04487942_0339 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.676 |
SEO08627.1 | SEO08654.1 | SAMN04487942_1679 | SAMN04487942_1680 | Outer membrane receptor for ferrienterochelin and colicins. | FecR family protein. | 0.947 |
SEO08627.1 | SEO08679.1 | SAMN04487942_1679 | SAMN04487942_1681 | Outer membrane receptor for ferrienterochelin and colicins. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.870 |
SEO08627.1 | SEO08714.1 | SAMN04487942_1679 | SAMN04487942_1682 | Outer membrane receptor for ferrienterochelin and colicins. | Hypothetical protein. | 0.893 |
SEO08654.1 | SEO08627.1 | SAMN04487942_1680 | SAMN04487942_1679 | FecR family protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.947 |
SEO08654.1 | SEO08679.1 | SAMN04487942_1680 | SAMN04487942_1681 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.925 |
SEO08654.1 | SEO08714.1 | SAMN04487942_1680 | SAMN04487942_1682 | FecR family protein. | Hypothetical protein. | 0.837 |
SEO08679.1 | SEN82814.1 | SAMN04487942_1681 | SAMN04487942_1099 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.601 |
SEO08679.1 | SEO08627.1 | SAMN04487942_1681 | SAMN04487942_1679 | RNA polymerase sigma-70 factor, ECF subfamily. | Outer membrane receptor for ferrienterochelin and colicins. | 0.870 |
SEO08679.1 | SEO08654.1 | SAMN04487942_1681 | SAMN04487942_1680 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.925 |
SEO08679.1 | SEO08714.1 | SAMN04487942_1681 | SAMN04487942_1682 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.810 |
SEO08679.1 | SEO20926.1 | SAMN04487942_1681 | SAMN04487942_2044 | RNA polymerase sigma-70 factor, ECF subfamily. | Anti-sigma-K factor rskA. | 0.567 |
SEO08679.1 | SEO21758.1 | SAMN04487942_1681 | SAMN04487942_2080 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase Rpb6. | 0.586 |
SEO08679.1 | SEO47744.1 | SAMN04487942_1681 | SAMN04487942_2850 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily; Manually curated; Belongs to the sigma-70 factor family. ECF subfamily. | 0.573 |
SEO08679.1 | rpoA | SAMN04487942_1681 | SAMN04487942_3234 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.586 |
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