Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEN59325.1 | SEN64119.1 | SAMN04487942_0312 | SAMN04487942_0456 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.449 |
SEN59325.1 | SEO03326.1 | SAMN04487942_0312 | SAMN04487942_1643 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.449 |
SEN59325.1 | SEO33812.1 | SAMN04487942_0312 | SAMN04487942_2487 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.449 |
SEN59325.1 | SEO38462.1 | SAMN04487942_0312 | SAMN04487942_2594 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.449 |
SEN59325.1 | SEO68427.1 | SAMN04487942_0312 | SAMN04487942_0127 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.449 |
SEN64119.1 | SEN59325.1 | SAMN04487942_0456 | SAMN04487942_0312 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.449 |
SEN64119.1 | SEO33812.1 | SAMN04487942_0456 | SAMN04487942_2487 | TonB-linked outer membrane protein, SusC/RagA family. | Outer membrane receptor proteins, mostly Fe transport. | 0.464 |
SEN64119.1 | SEO54088.1 | SAMN04487942_0456 | SAMN04487942_3011 | TonB-linked outer membrane protein, SusC/RagA family. | SusE outer membrane protein. | 0.452 |
SEN76700.1 | SEO33812.1 | SAMN04487942_0896 | SAMN04487942_2487 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.548 |
SEO03326.1 | SEN59325.1 | SAMN04487942_1643 | SAMN04487942_0312 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.449 |
SEO03326.1 | SEO33812.1 | SAMN04487942_1643 | SAMN04487942_2487 | TonB-linked outer membrane protein, SusC/RagA family. | Outer membrane receptor proteins, mostly Fe transport. | 0.458 |
SEO03326.1 | SEO54088.1 | SAMN04487942_1643 | SAMN04487942_3011 | TonB-linked outer membrane protein, SusC/RagA family. | SusE outer membrane protein. | 0.452 |
SEO33761.1 | SEO33812.1 | SAMN04487942_2485 | SAMN04487942_2487 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.400 |
SEO33761.1 | argS | SAMN04487942_2485 | SAMN04487942_2486 | Hypothetical protein. | arginyl-tRNA synthetase. | 0.580 |
SEO33812.1 | SEN59325.1 | SAMN04487942_2487 | SAMN04487942_0312 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.449 |
SEO33812.1 | SEN64119.1 | SAMN04487942_2487 | SAMN04487942_0456 | Outer membrane receptor proteins, mostly Fe transport. | TonB-linked outer membrane protein, SusC/RagA family. | 0.464 |
SEO33812.1 | SEN76700.1 | SAMN04487942_2487 | SAMN04487942_0896 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.548 |
SEO33812.1 | SEO03326.1 | SAMN04487942_2487 | SAMN04487942_1643 | Outer membrane receptor proteins, mostly Fe transport. | TonB-linked outer membrane protein, SusC/RagA family. | 0.458 |
SEO33812.1 | SEO33761.1 | SAMN04487942_2487 | SAMN04487942_2485 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.400 |
SEO33812.1 | SEO38462.1 | SAMN04487942_2487 | SAMN04487942_2594 | Outer membrane receptor proteins, mostly Fe transport. | TonB-linked outer membrane protein, SusC/RagA family. | 0.463 |
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