STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR64882.1ABC-type amino acid transport substrate-binding protein. (304 aa)    
Predicted Functional Partners:
SDR64881.1
Polar amino acid transport system permease protein.
   0.939
SDR84520.1
Glutamate transport system permease protein.
 
 0.935
SDR66901.1
Putative glutamine transport system permease protein.
 
 0.930
SDR66895.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.926
SDR84483.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.921
SDR66872.1
Putative glutamine transport system ATP-binding protein.
 
 0.852
SDR84457.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.821
SDR81999.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.787
SDS05685.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.766
SDR76447.1
Amino acid ABC transporter membrane protein, PAAT family.
   0.758
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.