STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR65728.1Putative ABC transport system permease protein. (404 aa)    
Predicted Functional Partners:
SDR65722.1
Putative ABC transport system ATP-binding protein.
 0.998
SDR65717.1
HlyD family secretion protein.
 
 
 0.990
SDR86662.1
Putative ABC transport system ATP-binding protein.
 0.989
SDR88870.1
Putative ABC transport system ATP-binding protein.
 0.986
SDR67816.1
Putative ABC transport system ATP-binding protein.
 0.984
ftsE
Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
     0.923
SDR88676.1
Cobalt/nickel transport system ATP-binding protein.
 
     0.917
SDR64851.1
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
     0.912
SDR65179.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
      0.900
SDR66872.1
Putative glutamine transport system ATP-binding protein.
 
      0.900
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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