STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR66464.1Glycosyltransferase involved in cell wall bisynthesis. (349 aa)    
Predicted Functional Partners:
SDR66457.1
Glycosyl transferase family 2.
 
    
0.835
SDR66306.1
Glycosyl transferase family 2.
  
     0.757
SDR66468.1
Glucose-1-phosphate thymidylyltransferase.
  
 
 0.726
SDR66474.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.723
SDR66320.1
Glycosyl transferase family 2.
  
     0.697
SDR66483.1
dTDP-glucose 4,6-dehydratase.
  
 
 0.632
SDR66448.1
Hypothetical protein.
       0.532
SDR66419.1
Glycosyl transferase family 2.
 
    
0.442
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.