STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR67079.1Hydrogenase nickel incorporation protein HypA/HybF. (114 aa)    
Predicted Functional Partners:
SDR67094.1
Hydrogenase nickel incorporation protein HypB.
 
 
 0.992
SDR81296.1
NADPH-dependent glutamate synthase beta chain.
 
     0.817
SDR81188.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
   0.783
SDS00745.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.658
SDR67067.1
Hypothetical protein.
       0.515
SDR97737.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 
 0.496
SDR91790.1
Molybdenum cofactor synthesis domain-containing protein.
    
   0.495
SDR67761.1
ABC-type lipoprotein export system, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
   
   0.467
SDR82374.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.429
SDR75323.1
NADH-quinone oxidoreductase subunit G.
  
 
 0.412
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.