STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR72095.1Hypothetical protein. (380 aa)    
Predicted Functional Partners:
SDS00745.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.870
SDR72106.1
Hypothetical protein; Manually curated.
       0.613
SDR78634.1
Uncharacterised ACR, YkgG family COG1556.
   
   0.582
SDR70946.1
Dihydroorotate oxidase B, electron transfer subunit.
  
  0.567
SDR84201.1
Anaerobic sulfite reductase subunit B.
  
  0.567
SDR94485.1
ferredoxin--NADP+ reductase.
  
  0.567
SDR72118.1
Multimeric flavodoxin WrbA.
 
     0.556
SDR72069.1
Predicted oxidoreductase.
 
     0.545
SDR72139.1
Cyclophilin-like.
       0.490
SDR72205.1
Predicted oxidoreductase.
 
     0.437
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.