STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR74109.1Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (922 aa)    
Predicted Functional Partners:
SDS00745.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.966
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 0.913
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.907
SDR65322.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.906
SDR65986.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.902
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
     
 0.902
SDR83008.1
Phosphoenolpyruvate carboxylase, type 1; Belongs to the PEPCase type 1 family.
     
 0.902
SDR66715.1
Fructose-bisphosphate aldolase, class II.
    
 0.895
SDR67525.1
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 
 0.895
SDR93161.1
4Fe-4S dicluster domain-containing protein.
     
 0.892
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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