STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR77627.1Glutamine synthetase. (696 aa)    
Predicted Functional Partners:
SDR77668.1
Glutamate synthase (NADH) large subunit.
  
 
 0.966
SDR82055.1
Glutamine synthetase.
    
 0.902
SDR76092.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.895
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 
  0.891
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
  
 
 0.888
SDR94515.1
Glutamate synthase (NADPH/NADH) small chain.
    
 0.884
SDR77645.1
Glutamate synthase (NADPH/NADH) small chain.
    
 0.867
SDR93196.1
Putative selenate reductase.
    
 0.807
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
  0.791
SDR89648.1
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.790
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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