STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR82681.1PucR C-terminal helix-turn-helix domain-containing protein. (454 aa)    
Predicted Functional Partners:
SDR82455.1
PucR C-terminal helix-turn-helix domain-containing protein.
 
     0.741
SDR82606.1
Hypothetical protein.
 
     0.636
SDR82713.1
Predicted arabinose efflux permease, MFS family.
 
     0.557
SDR97294.1
PucR C-terminal helix-turn-helix domain-containing protein.
 
     0.479
SDR82898.1
acetyl-CoA C-acetyltransferase.
 
   
 0.438
SDR82666.1
Multimeric flavodoxin WrbA.
       0.437
SDR82851.1
Uncharacterized OB-fold protein, contains Zn-ribbon domain.
 
     0.415
SDR99386.1
Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.
  
     0.400
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.