STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR84457.1Amino acid ABC transporter ATP-binding protein, PAAT family. (252 aa)    
Predicted Functional Partners:
SDR84483.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.996
SDR84520.1
Glutamate transport system permease protein.
 
 0.996
SDR64881.1
Polar amino acid transport system permease protein.
  0.980
SDR66895.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.977
SDR66901.1
Putative glutamine transport system permease protein.
 0.976
SDR76447.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.972
SDS05641.1
Putative lysine transport system permease protein.
  0.969
SDR65184.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.951
SDR84555.1
Glutamate transport system substrate-binding protein.
 
 0.947
SDR82034.1
Polar amino acid transport system substrate-binding protein.
  0.916
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.