STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR87044.1Protein FrlC. (282 aa)    
Predicted Functional Partners:
SDR87128.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
  
 0.939
SDR81329.1
Sugar or nucleoside kinase, ribokinase family.
 
 
 0.908
SDR65929.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family.
  
 
 0.888
SDR87316.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.888
SDR74873.1
Chorismate mutase / prephenate dehydratase.
     
 0.880
SDR86989.1
PTS system, mannose-specific IIA component.
 
    0.839
SDR84084.1
Predicted dehydrogenase.
 
 
 0.832
SDR64892.1
Predicted dehydrogenase.
 
 
 0.804
SDR81358.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
  
 0.783
SDR92277.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
  
 0.778
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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