STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR87142.1GntR family transcriptional regulator. (240 aa)    
Predicted Functional Partners:
SDS00745.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.844
SDR87158.1
GntR family transcriptional regulator.
 
    
0.831
SDR87191.1
Hypothetical protein.
       0.773
SDR87044.1
Protein FrlC.
 
  
 0.589
SDR87128.1
Fructoselysine-6-P-deglycase FrlB with duplicated sugar isomerase (SIS) domain.
 
    0.554
SDR87212.1
Uncharacterized membrane protein YsdA, DUF1294 family.
       0.509
SDR86989.1
PTS system, mannose-specific IIA component.
       0.445
SDR86967.1
PTS system, mannose-specific IIB component.
  
    0.411
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.