STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR88989.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (226 aa)    
Predicted Functional Partners:
SDR88948.1
Signal transduction histidine kinase.
  0.981
SDS00260.1
Signal transduction histidine kinase.
 0.970
SDR67325.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  0.930
SDR64823.1
Signal transduction histidine kinase.
 
 0.924
SDR85548.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.904
SDR74325.1
Signal transduction histidine kinase.
 0.901
SDR94050.1
Two-component system, OmpR family, sensor histidine kinase KdpD.
 0.892
SDR81979.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
     0.767
SDR88856.1
Putative ABC transport system permease protein.
  
   
 0.692
SDR99731.1
MarR family protein.
  
  0.670
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.