STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR92203.1PTS system IID component, Man family. (276 aa)    
Predicted Functional Partners:
SDR92222.1
PTS system, mannose-specific IIC component.
 0.999
SDR92249.1
PTS system, mannose-specific IIB component.
 
 0.998
SDR86935.1
PTS system, mannose-specific IIC component.
 0.994
SDR67583.1
PTS system, galactosamine-specific IIC component.
 0.988
SDR68143.1
PTS system, mannose-specific IIB component.
 
 0.988
SDR86967.1
PTS system, mannose-specific IIB component.
 
 0.977
SDR68164.1
PTS system, mannose-specific IIC component.
 0.969
SDR86989.1
PTS system, mannose-specific IIA component.
 
 0.948
SDR65929.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family.
  
 
 0.947
SDR87316.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.947
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.