STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR93470.1Trehalose-6-phosphate hydrolase. (564 aa)    
Predicted Functional Partners:
SDR93405.1
PTS system, trehalose-specific IIC component.
 
 
 0.952
glgA-2
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.869
SDR64965.1
PTS system sucrose-specific IIA component, Glc family /PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family.
 
 
 0.856
SDS03139.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.838
SDR64968.1
Beta-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.795
SDR96880.1
4-alpha-glucanotransferase.
  
 
 0.791
SDR67186.1
Alpha-galactosidase.
  
 
 0.761
SDR86382.1
Glycosyl transferase 4-like domain-containing protein.
   
 0.731
SDR65610.1
PTS system, glucose subfamily, IIA component.
  
 
 0.715
SDS04674.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.714
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.