STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS06239.1Transposase. (434 aa)    
Predicted Functional Partners:
SDS06214.1
IstB-like ATP binding protein.
 
    0.948
SDR79031.1
DNA replication protein DnaC.
 
    0.630
SDR79747.1
DNA replication protein DnaC.
 
    0.623
SDR79111.1
DNA replication protein DnaC.
 
    0.587
SDR79580.1
DNA replication protein DnaC.
 
    0.587
SDR83774.1
DNA replication protein DnaC.
 
    0.587
SDR92608.1
DNA replication protein DnaC.
 
    0.587
SDS06180.1
DNA replication protein DnaC.
 
    0.587
SDR64997.1
Fimbrial isopeptide formation D2 domain-containing protein.
  
     0.548
SDR64994.1
Pilin isopeptide linkage domain-containing protein.
  
     0.520
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.