STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS06664.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
SDR64994.1
Pilin isopeptide linkage domain-containing protein.
  
 0.777
SDR87855.1
Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.770
SDR71327.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.761
SDR66397.1
Lysophospholipase L1.
   
  0.707
SDR99520.1
Chromosome segregation ATPase.
   
 
 0.688
SDR77907.1
RNA polymerase sigma-70 factor, ECF subfamily.
    
  0.636
SDR64817.1
Acyl carrier protein.
   
   0.608
SDR65234.1
Acyl carrier protein.
   
   0.608
SDR66439.1
Hypothetical protein.
   
   0.608
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.608
Your Current Organism:
Olsenella umbonata
NCBI taxonomy Id: 604330
Other names: CCUG 58604, DSM 22620, JCM 16156, O. umbonata, Olsenella sp. A2, Olsenella sp. lac15, Olsenella sp. lac16, Olsenella sp. lac31, Olsenella umbonata Kraatz et al. 2011, strain lac31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.