STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0010Methanol dehydrogenase regulator. (309 aa)    
Predicted Functional Partners:
TSIB_0009
DUF58 domain containing protein.
 
  
 0.961
TSIB_0011
Hypothetical protein.
 
     0.839
TSIB_0012
Hypothetical protein.
       0.818
TSIB_0008
Hypothetical protein.
       0.796
TSIB_0013
Hypothetical protein.
       0.650
TSIB_0007
Oligosaccharyl transferase, STT3 subunit.
       0.595
htpX
Probable protease htpX like protein; Belongs to the peptidase M48B family.
  
  
 0.538
TSIB_1277
Zinc-dependent protease HtpX like rotein, M48 family.
  
  
 0.538
TSIB_0883
GHMP kinase.
   
    0.535
TSIB_0123
Malate oxidoreductase.
  
  
 0.509
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.