STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0067Formate dehydrogenase. (676 aa)    
Predicted Functional Partners:
TSIB_1627
Fe-S cluster-containing protein.
 
 0.989
TSIB_1132
Putative oxidoreductase, Fe-S subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
  
 0.944
TSIB_1861
FwdE-like tungsten formylmethanofuran dehydrogenase, subunit E.
 
 
 0.935
TSIB_1897
NAD(P)H:rubredoxin oxidoreductase.
   
 0.920
TSIB_1323
NoxA-2 NADH oxidase.
    
 0.905
TSIB_1296
Membrane-bound hydrogenase MBH 1, subunit Mbh1N (hydrogenase subunit).
  
  
 0.632
TSIB_1465
Ferredoxin:NADP+ oxidoreductase, subunit alpha.
    
 0.586
TSIB_1518
NADH:ubiquinone oxidoreductase, NADH-binding subunit F.
  
  
 0.583
TSIB_0963
Molybdenum cofactor biosynthesis protein MoeA.
 
  
 0.557
TSIB_1519
NADH:ubiquinone oxidoreductase, subunit E.
 
  
 0.538
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.