Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TSIB_0154Probable phosphate transport regulator. (205 aa)    
Predicted Functional Partners:
TSIB_0153
Magnesium transporter.
 
     0.951
TSIB_0155
Probable phosphate transport regulator.
 
    
0.893
TSIB_0208
Xylose isomerase domain-containing protein.
 
     0.697
TSIB_0156
Hypothetical protein.
       0.622
TSIB_1262
Predicted metalloprotease, containing Jab1/MPN domain.
 
     0.555
TSIB_1832
Hypothetical protein.
 
     0.526
TSIB_0152
Magnesium transporter.
       0.452
TSIB_1608
Archaeal heat shock regulator, ArsR family.
  
     0.449
TSIB_1011
Cobalt-activating carboxypeptidase, M32 family; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
   
    0.448
TSIB_0207
Acyl-CoA synthetase, subunit alpha.
       0.425
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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