Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
TSIB_0178ABC transporter, periplasmic binding protein. (323 aa)    
Predicted Functional Partners:
TSIB_0411
ABC transporter ATP-binding protein.
 
  
 0.953
TSIB_0412
ABC-type manganese/zinc transport system, permease component.
 
  
 0.950
rps14
30S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles.
 
  
 0.731
TSIB_0121
Manganese-dependent transcription regulator.
  
  
 0.570
TSIB_0176
Phosphoribosyl transferase domain protein.
 
     0.568
TSIB_0177
Hypothetical protein.
       0.508
TSIB_0175
ArgE/DapE-related deacylase.
 
   
 0.446
TSIB_0501
Fe2+ transport protein, putative.
 
   
 0.417
TSIB_2034
Archaeal ATPase.
 
     0.400
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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