Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
TSIB_0214ABC-type multidrug transport system, permease component. (232 aa)    
Predicted Functional Partners:
TSIB_0213
ABC-type multidrug transport system, ATPase component.
 
  
 0.920
TSIB_1371
ABC-type multidrug transport system, ATPase component.
 
  
 0.796
TSIB_0142
Daunorubicin resistance ATP-binding protein.
 
  
 0.791
TSIB_1983
Daunorubicin resistance ATP-binding protein DrrA.
 
  
 0.762
TSIB_0212
Transcription regulator, PadR-like family.
 
     0.665
TSIB_0141
Daunorubicin resistance ATP-binding protein.
 
  
 0.641
TSIB_0590
ABC-type multidrug transport system.
 
  
 0.624
TSIB_1388
Daunorubicin resistance ATP-binding like protein drrA.
 
  
 0.605
TSIB_1549
Putative ABC transporter.
 
  
 0.573
TSIB_0172
Membrane-associated metalloprotease, CaaX family.
  
  
 0.549
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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