STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0283NiFe hydrogenase I, subunit gamma. (297 aa)    
Predicted Functional Partners:
TSIB_0282
NiFe hydrogenase I, subunit beta.
  
  0.997
TSIB_0284
NiFe hydrogenase I, subunit delta.
 
  
 0.994
TSIB_0285
NiFe hydrogenase I, catalytic subunit alpha.
 
  
 0.991
TSIB_1520
NiFe hydrogenase II, subunit beta.
  
  0.990
TSIB_1522
NiFe hydrogenase II, subunit delta.
 
  
 0.969
TSIB_1523
NiFe hydrogenase II, catalytic subunit alpha.
 
  
 0.959
TSIB_1361
Cysteine synthase.
  
 
 0.904
TSIB_1521
NiFe hydrogenase II, subunit gamma.
  
  
 
0.904
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.884
TSIB_1517
Glutamate synthase beta chain-related oxidoreductase, containing 2Fe- 2S and 4Fe-4S clusters.
  
 
 0.763
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.