Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TSIB_0330Cellobiose/beta-glucoside ABC transporter, permease component CbtB. (335 aa)    
Predicted Functional Partners:
TSIB_0331
Cellobiose/beta-glucoside ABC transporter, permease component CbtC.
 
 0.996
TSIB_0329
Cellobiose/beta-glucoside ABC transporter, cellobiose binding subunit CbtA.
 
 
 0.979
TSIB_0333
Cellobiose/beta-glucoside ABC transporter, ATPase component CbtE.
 
 
 0.969
TSIB_0332
Cellobiose/beta-glucoside ABC transporter, ATPase component CbtD.
 
 
 0.968
TSIB_1054
ABC-type dipeptide transport system, permease component.
 
 0.945
TSIB_1755
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 0.936
TSIB_1052
ABC-type dipeptide transport system, dipeptide binding protein.
 
 0.877
TSIB_1055
ABC-type dipeptide transport system, ATPase component.
 
 
 0.866
TSIB_1756
ABC-type dipeptide/oligopeptide transport system, ATPase component.
 
 
 0.859
TSIB_0924
ABC-type dipeptide transport system, ATPase component.
 
 
 0.852
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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