STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0331Cellobiose/beta-glucoside ABC transporter, permease component CbtC. (282 aa)    
Predicted Functional Partners:
TSIB_0330
Cellobiose/beta-glucoside ABC transporter, permease component CbtB.
 
 0.996
TSIB_0333
Cellobiose/beta-glucoside ABC transporter, ATPase component CbtE.
 
 0.991
TSIB_0332
Cellobiose/beta-glucoside ABC transporter, ATPase component CbtD.
 
 0.990
TSIB_1055
ABC-type dipeptide transport system, ATPase component.
 
 0.975
TSIB_0329
Cellobiose/beta-glucoside ABC transporter, cellobiose binding subunit CbtA.
 
 
 0.974
TSIB_1756
ABC-type dipeptide/oligopeptide transport system, ATPase component.
 
 0.972
TSIB_0924
ABC-type dipeptide transport system, ATPase component.
 
 0.970
TSIB_1053
ABC-type dipeptide transport system, permease component.
 
 0.960
TSIB_1754
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 0.948
TSIB_1056
ABC-type dipeptide transport system, ATPase component.
 
 0.924
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.