STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0366Glycosidase. (329 aa)    
Predicted Functional Partners:
TSIB_0365
Glycogen debranching enzyme.
  
  
 0.932
TSIB_1681
Probable glycosyltransferase.
 
   
 0.869
TSIB_0364
L-fucose isomerase, C-terminal domain protein.
 
     0.859
TSIB_0367
Maltooligosaccharide ABC transporter, permease component.
       0.705
TSIB_0368
Maltooligosaccharide ABC transporter, ATPase component.
       0.705
TSIB_0361
Trehalose synthase.
  
  
 0.671
TSIB_0357
Sugar kinase; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.595
TSIB_0359
Trehalose/maltose ABC transporter, permease component.
     
 0.582
TSIB_0358
Trehalose/maltose ABC transporter, trehalose/maltose binding protein.
     
 0.573
TSIB_0362
Maltose-specific transcriptional repressor TrmB.
       0.543
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.