STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0367Maltooligosaccharide ABC transporter, permease component. (543 aa)    
Predicted Functional Partners:
TSIB_0368
Maltooligosaccharide ABC transporter, ATPase component.
 
 
  0.987
TSIB_0369
Maltooligosaccharide ABC transporter, sugar binding component.
 
 
 0.978
TSIB_0364
L-fucose isomerase, C-terminal domain protein.
 
     0.751
TSIB_0222
ABC-type iron(III) transport system, periplasmic component.
 
  
 0.741
TSIB_0366
Glycosidase.
       0.705
TSIB_0365
Glycogen debranching enzyme.
       0.699
TSIB_0363
Trehalose/maltose ABC transporter, ATPase component.
 
  
 0.666
TSIB_0122
Xanthine/uracilpermease.
       0.644
TSIB_0910
D-aminopeptidase.
       0.644
TSIB_0163
ABC transporter, ATP-binding protein.
 
  
 0.600
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.