spt5 protein (Thermococcus sibiricus) - STRING interaction network

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Score

spt5

NusG transcription antitermination protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (155 aa)

Predicted Functional Partners:

spt4

0.997

TSIB_0388

0.996

rpl11

0.995

rpl1

0.995

rpl10

0.993

rpoD

0.986

TSIB_0389

0.979

TSIB_0026

0.975

rpoK

0.971

rps3

0.970

Your Current Organism:

Thermococcus sibiricus

NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TSIB_0026	TSIB_0388	TSIB_0026	TSIB_0388	DNA-directed RNA polymerase, subunit E'.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
TSIB_0026	TSIB_0389	TSIB_0026	TSIB_0389	DNA-directed RNA polymerase, subunit E'.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.989
TSIB_0026	rpl10	TSIB_0026	TSIB_0384	DNA-directed RNA polymerase, subunit E'.	Acidic ribosomal like protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.629
TSIB_0026	rpoD	TSIB_0026	TSIB_0342	DNA-directed RNA polymerase, subunit E'.	DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family.	0.991
TSIB_0026	rpoK	TSIB_0026	TSIB_0347	DNA-directed RNA polymerase, subunit E'.	DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.995
TSIB_0026	spt4	TSIB_0026	TSIB_0027	DNA-directed RNA polymerase, subunit E'.	DNA-directed RNA polymerase, subunit e'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.998
TSIB_0026	spt5	TSIB_0026	TSIB_0381	DNA-directed RNA polymerase, subunit E'.	NusG transcription antitermination protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.975
TSIB_0388	TSIB_0026	TSIB_0388	TSIB_0026	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit E'.	0.994
TSIB_0388	TSIB_0389	TSIB_0388	TSIB_0389	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
TSIB_0388	rpl1	TSIB_0388	TSIB_0383	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release.	0.965
TSIB_0388	rpl10	TSIB_0388	TSIB_0384	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Acidic ribosomal like protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.966
TSIB_0388	rpl11	TSIB_0388	TSIB_0382	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.	0.967
TSIB_0388	rpoD	TSIB_0388	TSIB_0342	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family.	0.999
TSIB_0388	rpoK	TSIB_0388	TSIB_0347	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.	0.998
TSIB_0388	rps3	TSIB_0388	TSIB_0294	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.976
TSIB_0388	spt4	TSIB_0388	TSIB_0027	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit e'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.950
TSIB_0388	spt5	TSIB_0388	TSIB_0381	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusG transcription antitermination protein; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.996
TSIB_0389	TSIB_0026	TSIB_0389	TSIB_0026	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit E'.	0.989
TSIB_0389	TSIB_0388	TSIB_0389	TSIB_0388	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
TSIB_0389	rpl1	TSIB_0389	TSIB_0383	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release.	0.920

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