Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TSIB_0429Hypothetical protein. (251 aa)    
Predicted Functional Partners:
TSIB_0428
Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase.
       0.915
TSIB_0433
Metal-dependent phosphohydrolase, HD superfamily.
  
  
 0.901
TSIB_0430
Hydrolase, HAD superfamily.
       0.885
TSIB_0431
Hypothetical protein.
       0.885
TSIB_0432
Hypothetical protein.
       0.885
TSIB_0427
Arginase; Belongs to the arginase family.
     
 0.831
TSIB_0434
RNA-binding protein, containing KH domain.
  
  
 0.828
TSIB_0425
Hypothetical protein.
       0.827
TSIB_0426
Sjogren's syndrome/scleroderma autoantigen 1.
       0.827
aspS
Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp).
     
 0.780
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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