STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0639Proline dehydrogenase, delta subunit. (93 aa)    
Predicted Functional Partners:
TSIB_0640
Dye-linked L-proline dehydrogenase beta2 subunit.
 
 
 0.967
TSIB_0637
Dye-L-proDH alpha.
 
   
 0.945
TSIB_0638
Dye-linked L-proline dehydrogenase gamma2 subunit.
 
  
 0.942
TSIB_0636
Sarcosine oxidase, beta subunit.
 
 
 0.918
TSIB_0635
Sarcosine oxidase, alpha subunit.
 
    
0.564
TSIB_0641
Hypothetical protein.
       0.450
TSIB_1454
Predicted carboxylesterase, alpha/beta hydrolase superfamily.
  
 
 0.424
rps5
30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
  
 
 0.416
TSIB_1816
Carbon-nitrogen hydrolase.
   
  
 0.412
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.