Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0678Cell division inhibitor minD. (260 aa)    
Predicted Functional Partners:
TSIB_0679
Hypothetical protein.
       0.885
TSIB_0680
Putative thymidine phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
       0.829
TSIB_0676
NfeD nodulation like protein, probable membrane protein.
       0.792
TSIB_0677
Predicted membrane protease subunit, stomatin/prohibitin like protein.
       0.792
TSIB_0674
AlkA 3-methyladenine DNA glycosylase.
       0.588
TSIB_0675
Hypothetical protein.
       0.588
TSIB_0673
Hypothetical protein.
       0.580
TSIB_0672
Hypothetical protein.
       0.567
engB
Probable GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation.
 
   
 0.487
atpC
A1A0 ATP synthase, subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
   
 0.484
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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