TSIB_0804 protein (Thermococcus sibiricus) - STRING interaction network

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Score

TSIB_0804

DNA binding helix-turn helix protein. (179 aa)

Predicted Functional Partners:

rps3

0.923

rpl21e

0.831

rps3ae

0.812

rps19e

0.794

rpl18e

0.773

tbp

0.769

rps28e

0.769

rps10

0.769

rps14

0.768

rpl18

0.768

Your Current Organism:

Thermococcus sibiricus

NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TSIB_0804	rpl18	TSIB_0804	TSIB_0308	DNA binding helix-turn helix protein.	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.768
TSIB_0804	rpl18e	TSIB_0804	TSIB_0343	DNA binding helix-turn helix protein.	50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.773
TSIB_0804	rpl21e	TSIB_0804	TSIB_0605	DNA binding helix-turn helix protein.	50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.831
TSIB_0804	rps10	TSIB_0804	TSIB_1560	DNA binding helix-turn helix protein.	30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.769
TSIB_0804	rps14	TSIB_0804	TSIB_0303	DNA binding helix-turn helix protein.	30S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles.	0.768
TSIB_0804	rps19e	TSIB_0804	TSIB_0524	DNA binding helix-turn helix protein.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.794
TSIB_0804	rps28e	TSIB_0804	TSIB_0420	DNA binding helix-turn helix protein.	30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.769
TSIB_0804	rps3	TSIB_0804	TSIB_0294	DNA binding helix-turn helix protein.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.923
TSIB_0804	rps3ae	TSIB_0804	TSIB_1267	DNA binding helix-turn helix protein.	30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.812
TSIB_0804	tbp	TSIB_0804	TSIB_0138	DNA binding helix-turn helix protein.	Transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.769
rpl18	TSIB_0804	TSIB_0308	TSIB_0804	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	DNA binding helix-turn helix protein.	0.768
rpl18	rpl18e	TSIB_0308	TSIB_0343	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	50S ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.999
rpl18	rpl21e	TSIB_0308	TSIB_0605	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.999
rpl18	rps10	TSIB_0308	TSIB_1560	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rpl18	rps14	TSIB_0308	TSIB_0303	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles.	0.999
rpl18	rps19e	TSIB_0308	TSIB_0524	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl18	rps28e	TSIB_0308	TSIB_0420	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl18	rps3	TSIB_0308	TSIB_0294	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.999
rpl18	rps3ae	TSIB_0308	TSIB_1267	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rpl18	tbp	TSIB_0308	TSIB_0138	50S ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.681

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