Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TSIB_0837DUF88 domain containing protein. (174 aa)    
Predicted Functional Partners:
TSIB_0838
DUF88 multi-domain protein.
 
 
  
0.896
tmcA
Predicted ATPase, DUF699 family, fused to acetyltransferase domain; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP).
 
     0.696
TSIB_0369
Maltooligosaccharide ABC transporter, sugar binding component.
       0.644
TSIB_1147
Na+/Ca2+ exchange integral membrane protein.
       0.644
TSIB_1678
RecJ-like exonuclease, containing OB-fold nucleic acid-binding domains.
 
    0.587
TSIB_0839
Multisubunit sodium/hydrogen antiporter, MnhE subunit.
       0.552
TSIB_0840
Putative multisubunit Na+/H+ antiporter.
       0.552
TSIB_0841
Multisubunit sodium/hydrogen antiporter, MnhG subunit.
       0.552
TSIB_0842
Hypothetical protein.
       0.524
TSIB_0843
Multisubunit sodium/hydrogen antiporter, predicted subunit.
       0.524
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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