STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0855Glycosyl transferase. (378 aa)    
Predicted Functional Partners:
TSIB_0853
4-hydroxybenzoate octaprenyltransferase.
     
 0.820
TSIB_0854
Putative ABC transporter.
       0.818
TSIB_0857
Hypothetical protein.
       0.818
TSIB_0856
Putative amidase.
       0.775
TSIB_1115
Alpha-amylase (intracellular); Belongs to the glycosyl hydrolase 57 family.
  
 0.768
TSIB_2018
Capsular polysaccharide biosynthesis protein.
 
  
 0.684
TSIB_2049
Lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter).
 
  
 0.670
TSIB_1274
Bifunctional phosphatase/dolichol-phosphate glucosyltransferase.
 
  
 0.640
TSIB_2044
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.636
TSIB_0858
Hypothetical protein.
       0.628
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.