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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0916Hypothetical protein. (207 aa)    
Predicted Functional Partners:
TSIB_1222
Hypothetical protein; Belongs to the MEMO1 family.
    0.987
TSIB_0596
Act-like pyruvate formate-lyase activating enzyme related protein.
     0.914
TSIB_1167
Pyruvate formate-lyase activating enzyme.
     0.824
TSIB_0915
DUF77 domain containing protein.
       0.601
TSIB_0914
DUF373 domain containing protein.
       0.592
TSIB_0912
Endonuclease IV.
       0.522
TSIB_0917
Hypothetical protein.
       0.506
TSIB_0913
Hypothetical protein.
     
 0.500
TSIB_1065
Predicted dioxygenase.
 
     0.466
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.