STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_0953DUF402 domain containing protein. (169 aa)    
Predicted Functional Partners:
glyS
Glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly).
       0.845
TSIB_0952
Hypothetical protein; Belongs to the UPF0235 family.
       0.826
TSIB_1568
Predicted ATPase.
  
     0.512
TSIB_0007
Oligosaccharyl transferase, STT3 subunit.
  
     0.486
TSIB_0833
Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.483
TSIB_0418
Oligosaccharyl transferase STT3 subunit superfamily.
  
     0.476
TSIB_1857
Predicted Fe-S oxidoreductase.
  
     0.461
TSIB_1343
Probable brix domain-containing ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome.
  
     0.447
TSIB_1966
Transcriptional regulatory protein, arsR family.
  
     0.426
TSIB_2030
DNA polymerase, beta domain protein region.
 
     0.422
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.